In Okayama Prefecture, near the coast of the Seto Inland Sea, which sits between three of Japan’s islands, is a shell-mound cemetery called Tsukumo. There, preserved in layers of soil and shells, archaeologists had uncovered the remains of more than 170 prehistoric Japanese fisher-hunter-gatherers dating to more than 3,000 years ago. Among them was the remains of a man, designated No. 24, that had scientists baffled. No. 24 was missing his right leg and left hand. His bones were covered in lacerations, scratches, and gouges. J. Alyssa White, an archaeologist…